Curated Optogenetic Publication Database

Search precisely and efficiently by using the advantage of the hand-assigned publication tags that allow you to search for papers involving a specific trait, e.g. a particular optogenetic switch or a host organism.

Qr: author:"Andriana Koutsoumpa"
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1.

Rapid and reversible regulation of cell cycle progression in budding yeast using optogenetics.

blue EL222 S. cerevisiae Cell cycle control Endogenous gene expression
Cell Rep Methods, 30 Jul 2026 DOI: 10.1016/j.crmeth.2026.101541 Link to full text
Abstract: The complexity of the eukaryotic cell cycle complicates experiment design and data interpretation, limiting our understanding of how cells coordinate cell cycle processes. Traditional perturbation methods, including knockouts, deletions, and arrest-inducing chemicals, are limited by compensatory feedback interactions or pleiotropic side effects. Inducible synthetic systems offer greater specificity but often rely on external inducers, making rapid reversibility difficult. Here, we developed OPTO-Cln2, an optogenetic tool for light-controlled and reversible regulation of G1 progression in budding yeast. Using time-lapse microscopy, we show that OPTO-Cln2-strains rapidly switch between normal and altered G1 progression. Combining OPTO-Cln2 with a readout of TORC1 and PKA activity, we find that oscillatory signaling dynamics is coordinated with G1 progression. Finally, we show that OPTO-Cln2 enables at least two cycles of synchronous arrest and release in liquid cultures. This system provides a powerful approach for studying cell cycle dynamics and the coordination of cell growth with division.
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